VennDetail - A package for visualization and extract details

A set of functions to generate high-resolution Venn,Vennpie plot,extract and combine details of these subsets with user datasets in data frame is available.

Last updated 3 months ago

datarepresentationgraphandnetworkextractvenndiagram

6.75 score 29 stars 65 scripts 422 downloads

microbial - Do 16s Data Analysis and Generate Figures

Provides functions to enhance the available statistical analysis procedures in R by providing simple functions to analysis and visualize the 16S rRNA data.Here we present a tutorial with minimum working examples to demonstrate usage and dependencies.

Last updated 4 months ago

softwaregraphandnetworkmicrobiomemicrobiome-analysis

5.78 score 12 stars 25 scripts 291 downloads

o2plsda - Multiomics Data Integration

Provides functions to do 'O2PLS-DA' analysis for multiple omics data integration. The algorithm came from "O2-PLS, a two-block (X±Y) latent variable regression (LVR) method with an integral OSC filter" which published by Johan Trygg and Svante Wold at 2003 <doi:10.1002/cem.775>. 'O2PLS' is a bidirectional multivariate regression method that aims to separate the covariance between two data sets (it was recently extended to multiple data sets) (Löfstedt and Trygg, 2011 <doi:10.1002/cem.1388>; Löfstedt et al., 2012 <doi:10.1016/j.aca.2013.06.026>) from the systematic sources of variance being specific for each data set separately.

Last updated 4 months ago

integrationmulti-omicso2plsomicsplsdaopenblascppopenmp

4.78 score 6 stars 6 scripts 283 downloads

fctutils - Advanced Factor Manipulation Utilities

Provides a collection of utility functions for manipulating and analyzing factor vectors in R. It offers tools for filtering, splitting, combining, and reordering factor levels based on various criteria. The package is designed to simplify common tasks in categorical data analysis, making it easier to work with factors in a flexible and efficient manner.

Last updated 4 months ago

4.60 score 2 stars 4 scripts 157 downloads

eoffice - Export or Graph and Tables to 'Microsoft' Office and Import Figures and Tables

Provides wrap functions to export and import graphics and data frames in R to 'microsoft' office. And This package also provide write out figures with lots of different formats. Since people may work on the platform without GUI support, the package also provide function to easily write out figures to lots of different type of formats. Now this package provide function to extract colors from all types of figures and pdf files.

Last updated 2 years ago

3.85 score 1 stars 89 scripts 1.6k downloads