VennDetail - A package for visualization and extract details
A set of functions to generate high-resolution Venn,Vennpie plot,extract and combine details of these subsets with user datasets in data frame is available.
Last updated 4 months ago
datarepresentationgraphandnetwork
28 stars 2.57 score 41 dependenciesmicrobial - Do 16s Data Analysis and Generate Figures
Provides functions to enhance the available statistical analysis procedures in R by providing simple functions to analysis and visualize the 16S rRNA data.Here we present a tutorial with minimum working examples to demonstrate usage and dependencies.
Last updated 2 months ago
microbiomemicrobiome-analysis
12 stars 1.97 score 145 dependencieso2plsda - Multiomics Data Integration
Provides functions to do 'O2PLS-DA' analysis for multiple omics data integration. The algorithm came from "O2-PLS, a two-block (X±Y) latent variable regression (LVR) method with an integral OSC filter" which published by Johan Trygg and Svante Wold at 2003 <doi:10.1002/cem.775>. 'O2PLS' is a bidirectional multivariate regression method that aims to separate the covariance between two data sets (it was recently extended to multiple data sets) (Löfstedt and Trygg, 2011 <doi:10.1002/cem.1388>; Löfstedt et al., 2012 <doi:10.1016/j.aca.2013.06.026>) from the systematic sources of variance being specific for each data set separately.
Last updated 2 months ago
integrationmulti-omicso2plsomicsplsda
5 stars 1.29 score 34 dependencieseoffice - Export or Graph and Tables to 'Microsoft' Office and Import Figures and Tables
Provides wrap functions to export and import graphics and data frames in R to 'microsoft' office. And This package also provide write out figures with lots of different formats. Since people may work on the platform without GUI support, the package also provide function to easily write out figures to lots of different type of formats. Now this package provide function to extract colors from all types of figures and pdf files.
Last updated 2 years ago
1 stars 0.09 score 105 dependencies