Package: o2plsda
Type: Package
Title: Multiomics Data Integration
Version: 0.0.28
Authors@R: c(person("Kai","Guo",email = "guokai8@gmail.com",
           role = c("aut", "cre")
          ),
          person("Junguk","Hur",role = "aut"),
          person("Eva","Feldman",role = "aut")
          )
Description: Provides functions to do 'O2PLS-DA' analysis for multiple
        omics data integration. The algorithm came from "O2-PLS, a
        two-block (X±Y) latent variable regression (LVR) method with an
        integral OSC filter" which published by Johan Trygg and Svante
        Wold at 2003 <doi:10.1002/cem.775>. 'O2PLS' is a bidirectional
        multivariate regression method that aims to separate the
        covariance between two data sets (it was recently extended to
        multiple data sets) (Löfstedt and Trygg, 2011
        <doi:10.1002/cem.1388>; Löfstedt et al., 2012
        <doi:10.1016/j.aca.2013.06.026>) from the systematic sources of
        variance being specific for each data set separately.
License: GPL-3 + file LICENSE
Imports: dplyr, magrittr, parallel, ggplot2, ggrepel, methods, stats,
        grid, gridExtra, igraph, plotly, reshape2
Depends:
Encoding: UTF-8
Suggests: knitr, markdown, rmarkdown
VignetteBuilder: knitr
LinkingTo: Rcpp, RcppArmadillo
RoxygenNote: 7.3.3
URL: https://github.com/guokai8/o2plsda
NeedsCompilation: yes
Packaged: 2026-07-04 10:46:11 UTC; root
Author: Kai Guo [aut, cre], Junguk Hur [aut], Eva Feldman [aut]
Maintainer: Kai Guo <guokai8@gmail.com>
Config/pak/sysreqs: cmake libglpk-dev make libicu-dev libuv1-dev
        libxml2-dev libssl-dev
Repository: https://guokai8.r-universe.dev
Date/Publication: 2025-12-02 01:32:34 UTC
RemoteUrl: https://github.com/guokai8/o2plsda
RemoteRef: HEAD
RemoteSha: 56d3024a3c6ecae31f7c6cab7b11c6bc1b1098d2